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geometry format error

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  • ywang
    ywang
    ywang
    wrote on last edited by dmitoli
    #1

    Dear all,

    Thank you for reading this topic.

    I got this error:

    INPUT COORDINATES
    
    ATOM AT. N.              COORDINATES
      1   8     0.000000000000E+00  2.500000000000E-01  3.140000000000E-01
      2   8     1.500000000000E-01  1.660000000000E-01  1.570000000000E-01
      3   6     1.960000000000E-01  4.000000000000E-02  1.800000000000E-02
      4   6     0.000000000000E+00  5.400000000000E-02  3.900000000000E-02
      5   6     0.000000000000E+00  1.250000000000E-01  1.120000000000E-01
    ERROR **** geometry ****  FORMAT ERROR IN INPUT DECK
    

    It looks like the program can not read the coordination of Cr.
    the input and cif are attached:
    mil53crtest.d12
    181154opt.cif

    Thank you again,
    Wang

    1 Reply Last reply
    0
    • dmitoli
      dmitoli
      dmitoli
      Developer
      wrote on last edited by
      #2

      Dear user,

      the error message reported in the output (i.e., "ERROR **** geometry **** FORMAT ERROR IN INPUT DECK") clearly indicates an issue in the input file. In particular, in the geometry block, after specifying the lattice parameters and before listing the fractional coordinates of the atoms, you must include the number of atoms in the primitive cell (which, in your case, is 6).

      Hope this helps.
      Best regards,

      Davide Mitoli, PhD
      Postdoctoral Researcher
      Department of Chemistry - University of Torino
      V. Giuria 5, 10125 Torino (Italy)
      https://github.com/davidemitoli

      ywang 1 Reply Last reply
      1
      • dmitoli dmitoli

        Dear user,

        the error message reported in the output (i.e., "ERROR **** geometry **** FORMAT ERROR IN INPUT DECK") clearly indicates an issue in the input file. In particular, in the geometry block, after specifying the lattice parameters and before listing the fractional coordinates of the atoms, you must include the number of atoms in the primitive cell (which, in your case, is 6).

        Hope this helps.
        Best regards,

        ywang
        ywang
        ywang
        wrote on last edited by
        #3

        dmitoli Thank you for your reply.

        But I have already included the number of atoms in the input:

        6.812 16.733 13.038
        6
        24 0.250 0.250 0.250

        So I think the problem is not here.

        Best regards,
        Wang

        1 Reply Last reply
        0
        • dmitoli
          dmitoli
          dmitoli
          Developer
          wrote on last edited by
          #4

          Dear ywang,

          the issue is due to formatting: the number of atoms must be on a separate line, not at the end of the previous one. I have just checked this, and the input works correctly once formatted properly.

          Best,

          Davide Mitoli, PhD
          Postdoctoral Researcher
          Department of Chemistry - University of Torino
          V. Giuria 5, 10125 Torino (Italy)
          https://github.com/davidemitoli

          ywang 1 Reply Last reply
          2
          • dmitoli dmitoli

            Dear ywang,

            the issue is due to formatting: the number of atoms must be on a separate line, not at the end of the previous one. I have just checked this, and the input works correctly once formatted properly.

            Best,

            ywang
            ywang
            ywang
            wrote on last edited by
            #5

            dmitoli Thank you, it was a formatting problem with my notebook, now the issue has been solved.

            Best regards
            Wang

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